Cumacea-workshop i Bergen, 3-7 december 2012

Havforskningsinstituttet og Universitetet i Bergen vil med dette invitere dere til en workshop i cumacea-morfologi. Workshopen vil finne sted på Espegrend Marinbiologiske Stasjon (UiB) utenfor Bergen fra 3-7 desember 2012, og er en del av Artsdatabanken sin satsing på marin biodiversitet.

Materialet for denne workshopen har blitt samlet inn på MAREANO-programmet av
Havforskningsinstitutet, og kommer fra områdene utenfor Nordland og Finnmark. Det vil
være fokus på morfologisk identifikasjon, men prøvene vil også brukes videre til molekylære studier, det vil bli lagt opp til at både “barcoding” og annet molekylært arbeid vil bli utført i etterkant av workshopen. MAREANO vil benytte resultatene av den morfologiske identifiseringen i sitt arbeid og sine rapporter.
Vi har invitert Sarah Gherken fra University of Alaska til å være ekspert-lærer.

Workshopen vil være gratis å delta på (mat og losji er inkludert), men deltagerne må dekke egen reise og ta med eget disseksjonsutstyr. Påmeldingsfrist er 15 april 2012, send epost til Anne Helene Tandberg (annehelene.tandberg@imr.no), Havforskningsinstituttet, Tromsø.

Spørsmål kan også stilles till Henrik Glenner / Kenneth Meland, Institutt for Biologi, Marin biodiversitet, Universitetet i Bergen (henrik.glenner@bio.uib.no, kennet.meland@bio.uib.no)

Vi ser frem til å være med deg på Espegrend og se på cumacea!
vennlig hilsen,
Anne

Hugo de Boer försvarar sin avhandling

Fredagen den 30:e mars kl 13:00 försvarar Hugo de Boer sin etnobotaniska och växtsystematiska avhandling med titeln ” Snake Gourds, Parasites and Mother Roasting: Medicinal plants, plant repellents, and Trichosanthes (Cucurbitaceae) in Lao PDR” i Lindahlsalen på Evolutionsbiologiskt centrum (EBC), Norbyvägen 18, vid Uppsala universitet. Opponent är Prof. Victoria Reyes-Garcia, Universitat Autonoma de Barcelona. Om allt går vägen blir det knytkalas i Zootissalen på EBC till kvällen.

Här finner du mer information om Hugos forskning och avhandling.

Lycka till Hugo!

Stockholm Phylogenomics Group – Aktiviteter 2012

Hej,

vill ta tillfället i akt att presentera vårens aktiviteter inom Stockholm Phylogenomics Group (se http://www.phylogenomics.se/Blog/Spring-Activities).

Nästa evangemang är redan nu på måndag 26 Mars!

Stockholm Phylogenomics Group (SPG) med websidan (www.phylogenomics.se) har funnits under ett antal år men har haft en mer eller mindre episodisk verksamhet. Nyligen uppdaterades websidan med en kalender och anslagstavla (”blog”). Mer information (på engelska) på www.phylogenomics.se.

Mvh

Johan Nylander

Enheten för Biodiversitetsinformatik, Naturhistoriska riksmuseet (BI/NRM)

Bioinformatics Infrastructure for Life Sciences (BILS)

 

14th Nordic Meeting on Tropical Botany 6-8 August 2012 – Göteborg, Sweden

Come to Göteborg this summer to share your ideas and results in Tropical Botany with colleagues, old friends and new contacts from across the Nordic region (in a broad sense). This meeting is a continuation of the series of Nordic Meetings on Tropical Botany (originally focussed on the Neotropics). The meeting will include two days of presentations (6-7 August) followed by a one-day excursion (8 August).

The meeting will be relaxed and informal. We are especially keen to encourage students, and this is a good opportunity for students to give their first presentation to an international audience. Contributions from junior and established researchers are of course also very welcome. The presentations can cover any aspect of tropical botany (ecology, systematics, conservation, etc).

Registration: The registration deadline is 15 June 2012.

For more information visit the meeting’s website: http://www.bioenv.gu.se/english/research/tropicalbotany

Organising committee
Alexandre Antonelli
Claes Persson
Roger Eriksson
Rosemeri Morokawa

 

Bukhårsdjur i pressen

Tidningen Smålänningen har i dagens nummer ett fint reportage med Tobias Kånneby (disputerad vid Naturhistoriska riksmuseet i fjol) där han beskriver sin forskning om evolution och mångfald hos bukhårsdjur (Gastrotricha) i synnerhet samt systematikens betydelse för att förstå evolution i allmänhet.

Tyvärr finns inte reportaget på nätet så ni som inte prenumererar på Smålänningen får nöja er med den korta texten på tidningens framsida.

Grattis Tobias!

Hennig XXXI Meeting

The Thirty First Meeting of the Willi Hennig Society, under the auspices of University of California Riverside will be held on June 23-27 2012 at the beautiful and historic Mission Inn.

Details of the meeting symposia, registration and abstract submission can be found at http://www.cladistics.org/meetings.html

 Up to 5 Kurt Milton Pickett Intercontinental Travel Awards not to exceed $1000  will be given for student travel between continents.

Up to 10 Marie Stopes Travel Awards not to exceed $500 will be given for travel within the same continent as the meeting.

Botany 2012 conference information

Information om botanikkonferens med klara systematiska inslag, som kom via IAPTs sändlista.

Mats

The organizers of the Botany 2012 conference are pleased that IAPT will be joining us for our annual botany conference in Columbus, Ohio, July 7-11, 2012. I am the organizer of the systematics portion of the conference and I am writing with some information about the conference for those of you who are not regular attendees of our annual meeting.

We anticipate having roughly 1000 attendees at Botany 2012. The conference covers all areas of botany, but systematics is the largest portion of the conference. This year we will have a number of symposia, colloquia and other special sessions that are related to plant systematics, plus the many contributed papers and posters. In addition, there are workshops, field trips, and other activities that hopefully will be of interest. Details on symposia and other offerings are available on the conference web site (http://www.2012.botanyconference.org<http://www.2012.botanyconference.org/>
).

The conference web site is now open for abstract submissions and conference registration. Abstract submission deadline is 1 April. Early registration discount rates are good until 15 June. Feel free to contact me with any questions about abstract submission or conference registration.

I would like to make a couple quick points for your information:

Paper submissions- if you will be submitting a contributed paper you may submit it to a disciplinary section (e.g., Systematics Section/ASPT), or you may submit to a ”Topic” session that crosses disciplines. You will see a list of these as you begin the abstract submission process. The most relevant one for systematists is ”Biogeography.” If your paper has a primary focus on a biogeography (or phylogeography) question you should consider submitting it to the biogeography topic (which I also organize). Of course you are free to submit a paper to any section or topic that is appropriate.
The same information applies to poster submissions. Contributed papers are
15 minutes in length, inclusive of time for questions.

The ASPT banquet will be held on Tuesday night. You can order tickets when you register for the conference. Note that discounted price tickets are available for students. We hope that you will join us for the mixer and banquet.

Field trips- The annual conference always has a great selection of field trips for attendees. You can find information about field trips on the conference web site.

Registration- The registration process on the web site is quite straightforward. When you register for the conference you will use a ”ConferenceID” (for BSA members this is the same as your ”BotanyID”). If you are not a member of BSA you will need to set up a ConferenceID. You will find instructions on the web page. You can go back to your registration later on the web site and add tickets for banquets or field trips if necessary. But field trips do fill up and it is often too late to purchase banquet tickets on site at the conference so be sure to do this online as soon as possible.

When you register for the conference please be sure to check the box for IAPT membership (and other societies if appropriate). Registration rate is reduced for members of participating societies.

We look forward to you joining us in Columbus. Let me know if you have any questions.

With best wishes,

Pat

Patrick Herendeen
(pherendeen@chicagobotanic.org<mailto:pherendeen@chicagobotanic.org>)
ASPT and BSA Systematics Section Program Director Chicago Botanic Garden

PhD Fellowship in Systematic Botany at the Natural History Museum of Denmark

A fully funded PhD fellowship on phylogenetics of tribe Cinchoneae (Rubiaceae) is available from 01-05-2012 or soon thereafter in the Botany group at the Natural History Museum of Denmark, Faculty of Science, University of Copenhagen, Denmark.

The fellowship will be an integral part of an interdisciplinary 3-year research project entitled: ”The quest for Cinchona – a phylogenetic tale” co-financed by the Faculty of Science, University of Copenhagen and the Carlsbergfoundation. The research project is international and includes several collaborators in Denmark, Sweden and Latin America.

Project area

The PhD student will be conducting extensive fieldwork with local collaborators in Latin America (e.g. Peru, Ecuador, Colombia) to collect material of Rubiaceae tribe Cinchoneae. The project will include DNA-sequencing and phylogenetic analyses of tribe Cinchoneae. The phylogeny of tribe Cinchoneae will be used to address various questions within the larger project exploring the quest for Cinchona such as diversification, correlation with plant defensive chemistry, biogeography of the Andes, population genetics, taxonomy etc. depending on the development of the project and the student’s background and interests.

Primary supervisor is Associate Professor Nina Rønsted, The Natural History Museum of Denmark. Co-supervisors are Alexandre Antonelli, Gothenburg Botanical Garden, and Claes Persson, Gothenburg University (Sweden).

The applicant must be prepared for extensive periods of fieldwork in Latin America (e.g. Peru, Ecuador, Colombia) and research exchange at Gothenburg Botanical Garden and Gothenburg University (Sweden) is envisioned.

Qualifications

a) MSc in biology or related area, preferably with a strong background in systematic botany.

b) Tropical field experience (botanical collection) is an advantage.

c) Experience with molecular techniques (DNA sequencing) and phylogenetic analysis is an advantage.

e) Ability to independently run research projects, in particular in the field away from day-to-day supervision.

f) Excellent English speaking, reading and writing skills are required.

g) Spanish speaking and reading is an advantage due to extensive fieldwork in Latin America.

Place of employment and principal place of work

Botanic Garden and Museum, Natural History Museum of Denmark, Sølvgade 83, Opg. S, DK-1307 Copenhagen.

Terms of employment

The successful PhD candidate will be offered a full-time Ph.D. position for a period of three years, contingent on a satisfactory performance, with the specific intent that it results in a Ph.D. degree and scientific publications. It is a prerequisite for the appointment as a Ph.D.-fellow, that the person concerned can be registered as a Ph.D. fellow according to the Ministry of Science, Technology and Innovation Executive Order no 18 of 14. January 2008. Information about the Ph.D. programs at the Faculty of Science can be found at http://www.science.ku.dk/phd/.

The salary depends on seniority, as agreed between the Ministry of Finance and the Danish Confederation of Professional Associations within the range of 23,000-30,000 DKK/month (approximately 3,100-4,000 Euro/month).

Further information can be obtained from Associate Professor Nina Rønsted (e-mail: nronsted@snm.ku.dk). General information on the botany group and the Natural History Museum of Denmark can be found at www.snm.ku.dk.

How to apply

Applications must include (i) a motivation for the application with statement of your research interests (0.5 A4 page), (ii) curriculum vitae (maximum 2 pages), (iii) list of publications, (iv) a copy of MSc diploma and grade transcript, (v) a short abstract of the M.Sc. thesis or equivalent, and (vi) the names, e-mails, telephone numbers and addresses of 2-3 referees.

The main criterion for selection will be the research potential of the applicant and match with the project. In addition, fulfillment of the above mentioned qualifications will be an advantage.

Applications should be sent electronically by using the link below.

Deadline for applications is 01-04-2012. Applications received after the deadline will not be considered.

The University of Copenhagen wishes to reflect the diversity of society and welcomes applications from all qualified candidates regardless of personal background.

Apply online (Full link: https://ssl1.peoplexs.com/Peoplexs22/CandidatesPortalNoLogin/ApplicationForm.cfm?PortalID=3789&VacatureID=202806)

 Københavns Universitet er Danmarks ældste universitet, grundlagt 1479, og hører til blandt de største i Norden og de højest rangerende i Europa. Universitetet består af otte fakulteter, som omfatter biovidenskab, farmaceutisk videnskab, humaniora, jura, naturvidenskab, samfundsvidenskab, sundhedsvidenskab og teologi. www.ku.dk

Frist: 01-04-2012

Arbejdsgiver: Det Naturvidenskabelige Fakultet

Webseminarium om RevBayes ikväll kl 20:00

Ikväll kl 20:00 svensk tid anordnar phyloseminar.org en intressant videokonferens om RevBayes. Om du vill ta del av seminariet bör du så snart som möjligt följa instruktionerna på deras hemsida för att ansluta (man behöver bl a skaffa ett konto och installera en java-klient). Mer info om föredraget:

”RevBayes: An R like Environment for Bayesian phylogenetic inference”
John P. Huelsenbeck and Sebastian Höhna (UC Berkeley and Stockholm University)

Description:

RevBayes is a computer program that uses directed acyclic graphs
(DAG’s) to specify any type of model, to hold the model and data in
memory, and to compute the likelihood of the parameters of the model.
DAG’s provide a framework for the construction of modular models.
Models can easily be extended and/or parts of the model exchanged
(e.g., the substitution process and clock model) and several models
can be combined. The design of RevBayes should allow the
implementation of any extension to existing models. RevBayes is mainly
developed for Bayesian phylogenetic analyses, but it can be extended
to any inference on probabilistic models.

In this talk, I will give a brief introduction to the concept of DAG’s
and how they are used to construct a model. Once the model is
specified, I will show how to simulate new observations under the
model and how to estimate its parameters. I will demonstrate this in
the RevLanguage, which is an R-like language for building DAG’s for
phylogenetic problems. The RevLanguage is used interactively to
specify the model, as done with R. I will show how a full phylogenetic
model is specified, step-by-step. I will mainly focus on various
standard substitution models, relaxed clock models, and divergence
times priors. Specifically, I will show a new birth-death model with
speciation and extinction rates varying over time and use this in a
integrative analysis. In the integrative analysis I condition only on
the alignment (only the alignment is considered to be known) and
estimate the tree and divergence times simultaneously as well as the
speciation and extinction rates.

West Coast USA:         11:00 (11:00 AM) on Wednesday, February 29
East Coast USA:         14:00 (02:00 PM) on Wednesday, February 29
England:        19:00 (07:00 PM) on Wednesday, February 29
France:         20:00 (08:00 PM) on Wednesday, February 29
Japan:  04:00 (04:00 AM) on Thursday, March 01
New Zealand:    08:00 (08:00 AM) on Thursday, March 01